图书情报工作

图书情报工作 >

2013 , Vol. 57 >Issue 17: 21 - 25,33

DOI: https://doi.org/10.7536/j.issn.0252-3116.2013.17.004

专题：数字资源语义互联模式研究与互联方法实例

领域本体映射的语义互联方法研究——以药物本体为例

  • 王丽伟 ,
  • 王伟 ,
  • 高玉堂 ,
  • 刘宏芳
展开
  • 1. 吉林大学公共卫生学院;
    2. 梅奥医学中心博士研究生;
    3. 长春市妇产医院
王丽伟,吉林大学公共卫生学院副教授,梅奥医学中心博士研究生;高玉堂,长春市妇产医院院长,副主任医师;刘宏芳,梅奥医学中心副教授,临床自然语言处理项目主任,博士。

收稿日期: 2013-05-06

  修回日期: 2013-07-02

  网络出版日期: 2013-09-05

基金资助

本文系国家社会科学基金项目"数字资源语义互联模式研究"(项目编号:10BTQ025)研究成果之一。

收起

Semantic Interconnection Method for Mapping Multiple Domain Ontologies：Exemplified by Drug Ontology

  • Wang Liwei ,
  • Wang Wei ,
  • Gao Yutang ,
  • Liu Hongfang
Expand
  • 1. School of Public Health, Jilin University ChangChun 130021;
    2. Department of Health Sciences Research, Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester 55901, MN, USA;
    3. Maternity Hospital of Changchun; Changchun 130042

Received date: 2013-05-06

  Revised date: 2013-07-02

  Online published: 2013-09-05

Fold

摘要

认为领域本体自身结构的复杂性和领域本体之间的异构性,使领域本体映射方法成为实现本体映射的难点之一。提出多领域本体映射与聚类理论模型,并以该模型为指导,选取药物领域本体RxNorm与NDF-RT(美国国家药物文件—参考术语)进行映射实例研究,提出RxNorm与NDF-RT两个领域本体之间映射的一种新方法,并利用NDF-RT提供的药物分类信息实现RxNorm本体中药物信息的分类聚合,为数字资源的语义互联提供新思路。

关键词： 领域本体; 映射; 聚合; 理论模型; 算法

本文引用格式

王丽伟 , 王伟 , 高玉堂 , 刘宏芳 . 领域本体映射的语义互联方法研究——以药物本体为例[J]. 图书情报工作, 2013 , 57(17) : 21 -25,33 . DOI: 10.7536/j.issn.0252-3116.2013.17.004

Abstract

Due to the complexity of the domain ontology itself and the heterogeneity between domain ontologies, methods for mapping domain ontologies become one of difficulties in ontology mapping. This paper proposes a theoretical model for mapping multiple domain ontologies and aggregation. Guided by this model, a mapping experiment between RxNorm and NDF-RT (the National Drug File-Reference Terminology) is conducted with a new approach for mapping. The classification and aggregation for drug information in RxNorm based on the classification mechanism provided by NDF-RT is realized. This paper provides a new thinking for the semantic interconnection of digital resources.

Key words： domain ontology; mapping; aggregation; theoretical model; algorithm

参考文献

[1] Kumar S K,Harding J A.Ontology mapping using description logic and bridging axioms[J].Computers in Industry,2013,64(1):19-28.
[2] Wang Rujuan, Wang Lei, Liu Lei, et al. Combination of the improved method for ontology mapping[EB/OL].[2013-06-21].http://www.sciencedirect.com/science/article/pii/S187538921200781X.
[3] Hartung M,Groβ A,Rahm E.COnto-Diff:Generation of complex evolution mappings for life science ontologies[J].Journal of Biomedical Informatics, 2013,46(1):15-32.
[4] Bock J,Hettenhausen J.Discrete particle swarm optimisation for ontology alignment[J].Information Sciences,2012,192(1) :152-173.
[5] 米杨,曹锦丹.基于PROMPT 的本体映射实例分析[J].情报学报,2010,29(6):987-991.
[6] 吕刚,郑诚,胡春玲.基于概念分类的多本体映射方法研究[J].计算机应用研究,2011,28(9):3335-3337.
[7] 王效岳,胡泽文,白如江.WordNet与SUMO本体之间的映射机制研究[J].现代图书情报技术,2011,27(1):22-30.
[8] An Overview of RxNorm[EB/OL].[2012-06-15]. http://www.nlm.nih.gov/research/umls/rxnorm/overview.html.
[9] Zhou Li, Plasek J M, Mahoney L M, et al.Mapping partners master drug dictionary to rxNorm using an NLP-based approach[J]. Journal of Biomedical Informatics, 2011,45(4):626-633.
[10] NLM. UMLS许可协议[EB/OL].[2012-09-15]. http://www.nlm.nih.gov/research/umls/license.html.
[11] Peters L, Bodenreider O. Using the RxNorm Web services API for quality assurance purposes[EB/OL].[2013-06-21]. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2656097/.
[12] National Drug File-Reference Terminology (NDF-RTTM) Documentation[EB/OL].[2012-06-12]. http://evs.nci.nih.gov/ftp1/NDF-RT.
[13] Palchuk M B, Klumpenaar M, Jatkar T, et al. Enabling hierarchical view of RxNorm with NDF-RT drug classes[EB/OL].[2013-06-21]. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3041416/.
[14] Pathak J, Murphy S P, Willaert B N, et al. Using RxNorm and NDF-RT to classify medication data extracted from electronic health records: Experiences from the rochester epidemiology project[EB/OL].[2013-06-21]. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3243205/.
[15] Pathak J, Chute C G. Analyzing categorical information in two publicly available drug terminologies: RxNorm and NDF-RT[J].Journal of the American Medical Informatics Association, 2010,17(4):432-439.

Options
文章导航

/

〈 〉